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use an open source password manager that supports them.

as others mentioned, there's BitWarden (cross-platform, self-hostable), but if you want something simple there's KeePassXC (and you can put the store file on a dropbox shared folder)

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I resent that I need a special app to "manage" them. I want to know where this key is on my filesystem so I can back it up and edit it myself, not have to use some app to access it. My ssh authorized_keys is just a text file. I can "manage" it with something as simple as vim. Maybe KeePassXC and BitWarden give you that simplicity, if so great!
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KeePassXC "supports passkeys" but the website/app that offers the passkey needs to offer it in the correct way for KeePassXC to ingest it. I've found a fair amount of scenarios where they don't correctly let you drop it into them.
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The cabal of evil behind the passkey project actively have KeePassXC on their naughty list fore deigning to allow users to access their keys, and specifically included in the standard the means to discriminate between different passkey vault providers. It is the opposite of an open system, and cannot, under any circumstances, be trusted. Do not use passkeys, tell other people not to use passkeys, and make sure to not let shills astroturf conversations about passkeys unopposed.
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You can use a passkey that's tied to a Yubikey.
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The problem here is i want to have more than 1 yubikey, so if i lose it, all is not lost... I can't do that with the current implementations unless i present N yubikeys to every new account i make. Which makes an off-site backup yubikey impossible. With my current yubikey usage with password store, my "offline" yubikey can be brought in whenever i want to decrypt the passwords, including ones inserted while the key was in storage.

Also yubikeys have limited passkey slots (100, 25 with old firmware)

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Also, where do I store the backup Yubikey, or any other pass key owning device for that matter? It has to be easily accessible to set up the pass keys, but also safe from accidents like house fire.

There's a strange tension where I want to use pass keys because they are easy to use but also they are easy to lose, so I choose a KeePass synced over cloud and deal with a bit of a hassle by having to copy/paste my passwords.

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I think technically you can just register the public key of the passkey and only need it on-hand for login
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Technically i would think so too, but is that how it's implemented? (I legit don't know, but my feeling was always that you had to add them while they're present, especially as there's different passkeys for different sites, to do it offline do you pregenerate 100 keys for each device to assign later?)
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You can register multiple passkeys for a single user, there is no lock in
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