That is—the agent scored 100% on 20% of tasks, but on average it got 54% of the "score" awarded in the exam. One number reflects partial progress, the other one doesn't. The authors of the benchmark prefer you to look at the lower number (because they want to show their benchmark as capturing useful gaps in capabilities and with a lot of room for improvement), the authors of the models want you to look at the higher number (because they want you to think of their models as capable)
What variance is acceptable to publish without a retraction?
Like the other person said 5% variation is probably expected
The answer is there can be dramatic difference running a benchmark one time, because LLMs are not deterministic. A proper methodology would ask each question 20 times and calculate the mean correctness across experiments.
The reason is that the temperature parameter introduces random behavior.