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> People already live in different altitudes, ie with vastly different amounts of rock between themselves and the bits of the earth that produce her magnetic field.

It's not really the same thing. Construction and especially the high content of charged metal (whether it's power conduits or plain old frame) may make a considerable difference.

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What about flowing underground water when sleeping on the ground?

What about the metal frame of a bed?

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Do many people sleep in such tall buildings? Obviously they exist, but I can't think of any over-20 story residential building I've ever been in. Office space, sure, but not residential.
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The amount of people who would regularly sleep in such a building is a minuscule fraction of the world population.
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