When a certificate is logged to CT, you get back an SCT, and the issuing CA will normally include that in the certificate. The browser will then accept this certificate as it has the correct SCTs (there are always at least two).
The attacker issued certificate hasn't been logged, so can't have an SCT, so won't be accepted by the browser.
We can't say that no certificates have been issued by an attacker. We can say that no certificates have been issued by an attacker that a modern browser client would accept.