(Also, someone help a non-native speaker: I think the "effect"s above should be "affect", but for some reason that looked wrong here. Why is that?)
However, both have alternative meanings as the other part of speech.
Affect as a noun means emotion or disposition, and is mostly used in psychology. Your psychologist may say you have a depressed affect.
Effect as a verb means to bring about. You might say that a successful protest effected change in society.
As a verb, in addition to “have an impact on,” affect can also mean “to pretend to have,” like “she affected an air of mystery,” although this is less common.
The way you used "effect" here, its verb sense of "to bring about or cause" is the one that suggests itself, which isn't what you meant.
The simple way to keep the words' overlapping meanings straight, is that it's "effect" when it's a noun, "affect" when it's a verb. "Effect" can also be a verb, and "affect" can be a noun, but those definitions don't overlap.
Your post did indeed call for "affect", as you suspected.
Edit: hmm, re-reading it now, affect does look right. Weird.
It's definitely wrong in that paragraph.
and technology choices made in Firefox can and do affect Thunderbird, just like they effect e.g. Zen Browser or Tor Browser.
I'm no expert on the rules of english, but I think maybe it would be slightly more gramatically correct to say that "choices made in Firefox can and do have an effect on Thunderbird". I would probably have phrased it like that. Maybe that's why it looks wrong to you?English is a bit of a bastard language IIUC, and so we accept the way you've phrased it too, but in that case it should be "affect".
I hope this helps rather than making things more confusing! ;)